MS/MS Batch Search
All the MS/MS spectra should be saved as a
CSV file (download an example).
The file size for search is limited to 100 MS/MS spectra. If the file contains more than 100 MS/MS spectra, a file split program (download split program, download Tutorial for instruction) can be used to split the large file into small files with a limit of 100 MS/MS spectra per file.
The split files need to be uploaded individually for search. The individual search result is saved as a CSV file to a local computer from the result display page. After all the split files are searched and the results are saved into a local folder, a file merge program (download merge program, download Tutorial for instruction) can be used to merge all the individual files into the final CSV file or table.